A Comparative Study in Ancestral Range Reconstruction Methods: Retracing the Uncertain Histories of Insular Lineages

TitleA Comparative Study in Ancestral Range Reconstruction Methods: Retracing the Uncertain Histories of Insular Lineages
Publication TypeJournal Article
Year of Publication2008
AuthorsClark, JR, Ree RH, Alfaro ME, King MG, Wagner WL, Roalson EH
JournalSystematic Biology
Volume57
Issue5
Pagination693–707
Abstract

Island systems have long been useful models for understanding lineage diversification in a geographic context, especially pertaining to the importance of dispersal in the origin of new clades. Here we use a well-resolved phylogeny of the flowering plant genus Cyrtandra {(Gesneriaceae)} from the Pacific Islands to compare four methods of inferring ancestral geographic ranges in islands: two developed for character-state reconstruction that allow only single-island ranges and do not explicitly associate speciation with range evolution {(Fitch} parsimony {[FP;} parsimony-based] and stochastic mapping {[SM;} likelihood-based]) and two methods developed specifically for ancestral range reconstruction, in which widespread ranges (spanning islands) are integral to inferences about speciation scenarios (dispersal-vicariance analysis {[DIVA;} parsimony-based] and dispersal-extinction-cladogenesis {[DEC;} likelihood-based]). The methods yield conflicting results, which we interpret in light of their respective assumptions. {FP} exhibits the least power to unequivocally reconstruct ranges, likely due to a combination of having flat (uninformative) transition costs and not using branch length information. {SM} reconstructions generally agree with a prior hypothesis about dispersal-driven speciation across the Pacific, despite the conceptual mismatch between its character-based model and this mode of range evolution. In contrast with narrow extant ranges for species of Cyrtandra, {DIVA} reconstructs broad ancestral ranges at many nodes. {DIVA} results also conflict with geological information on island ages; we attribute these conflicts to the parsimony criterion not considering branch lengths or time, as well as vicariance being the sole means of divergence for widespread ancestors. {DEC} analyses incorporated geological information on island ages and allowed prior hypotheses about range size and dispersal rates to be evaluated in a likelihood framework and gave more nuanced inferences about... {[ABSTRACT} {FROM} {AUTHOR]}

DOI10.1080/10635150802426473
AttachmentSize
Clark_et_al-2008-SystBio.pdf3.94 MB